labmcp/CLAUDE.md

CLAUDE.md - Project Context

This file provides context for Claude when working on this project.

Project Overview

LabMCP is a collection of Model Context Protocol (MCP) servers written in Go, designed to extend Claude's capabilities with custom tools. The repository is structured to be generic and extensible, allowing multiple MCP servers to be added over time.

MCP Servers

NixOS Options (nixos-options)

Search and query NixOS configuration options. Uses nixpkgs as source.

Home Manager Options (hm-options)

Search and query Home Manager configuration options. Uses home-manager repository as source.

Both servers share the same architecture:

• Full-text search across option names and descriptions
• Query specific options with type, default, example, and declarations
• Index multiple revisions (by git hash or channel name)
• Fetch module source files
• PostgreSQL and SQLite backends

Technology Stack

• Language: Go 1.24+
• Build System: Nix flakes
• Databases: PostgreSQL and SQLite (both fully supported)
• Protocol: MCP (Model Context Protocol) - JSON-RPC over STDIO or HTTP/SSE
• Module Path: git.t-juice.club/torjus/labmcp

Project Status

Complete and maintained - All core features implemented:

• Full MCP servers with 6 tools each
• PostgreSQL and SQLite backends with FTS
• NixOS modules for deployment
• CLI for manual operations
• Comprehensive test suite

Repository Structure

labmcp/
├── cmd/
│   ├── nixos-options/
│   │   └── main.go             # NixOS options CLI
│   └── hm-options/
│       └── main.go             # Home Manager options CLI
├── internal/
│   ├── database/
│   │   ├── interface.go        # Store interface
│   │   ├── schema.go           # Schema versioning
│   │   ├── postgres.go         # PostgreSQL implementation
│   │   ├── sqlite.go           # SQLite implementation
│   │   └── *_test.go           # Database tests
│   ├── mcp/
│   │   ├── server.go           # MCP server core + ServerConfig
│   │   ├── handlers.go         # Tool implementations
│   │   ├── types.go            # Protocol types
│   │   ├── transport.go        # Transport interface
│   │   ├── transport_stdio.go  # STDIO transport
│   │   ├── transport_http.go   # HTTP/SSE transport
│   │   ├── session.go          # HTTP session management
│   │   └── *_test.go           # MCP tests
│   ├── options/
│   │   └── indexer.go          # Shared Indexer interface
│   ├── nixos/
│   │   ├── indexer.go          # Nixpkgs indexing
│   │   ├── parser.go           # options.json parsing (shared)
│   │   ├── types.go            # Channel aliases, extensions
│   │   └── *_test.go           # Indexer tests
│   └── homemanager/
│       ├── indexer.go          # Home Manager indexing
│       ├── types.go            # Channel aliases, extensions
│       └── *_test.go           # Indexer tests
├── nix/
│   ├── module.nix              # NixOS module for nixos-options
│   ├── hm-options-module.nix   # NixOS module for hm-options
│   └── package.nix             # Parameterized Nix package
├── testdata/
│   └── options-sample.json     # Test fixture
├── flake.nix
├── go.mod
├── .mcp.json                   # MCP client configuration
├── CLAUDE.md                   # This file
├── README.md
└── TODO.md                     # Future improvements

MCP Tools

Both servers provide the same 6 tools:

Tool	Description
search_options	Full-text search across option names and descriptions
get_option	Get full details for a specific option with children
get_file	Fetch source file contents from indexed repository
index_revision	Index a revision (by hash or channel name)
list_revisions	List all indexed revisions
delete_revision	Delete an indexed revision

Key Implementation Details

Database

• Schema versioning with automatic recreation on version mismatch
• Full-text search: SQLite FTS5, PostgreSQL tsvector/GIN
• Path-based queries use LIKE for exact prefix matching
• Batch operations for efficient indexing

Indexing

• Uses nix-build to evaluate options from any revision
• File indexing downloads tarball and stores allowed extensions (.nix, .json, .md, etc.)
• File indexing enabled by default (use --no-files to skip)
• Skips already-indexed revisions (use --force to re-index)

Transports

• STDIO: Default transport, line-delimited JSON-RPC (for CLI/desktop MCP clients)
• HTTP: Streamable HTTP transport with SSE (for web-based MCP clients)
  • Session management with cryptographically secure IDs
  • Configurable CORS (localhost-only by default)
  • Optional TLS support
  • SSE keepalive messages (15s default)

Security

• Revision parameter validated against strict regex to prevent Nix injection
• Path traversal protection using filepath.Clean() and filepath.IsAbs()
• NixOS module supports connectionStringFile for PostgreSQL secrets
• Systemd service runs with extensive hardening options
• HTTP transport hardening:
  • Request body size limit (1MB default)
  • Server timeouts (read: 30s, write: 30s, idle: 120s, header: 10s)
  • Maximum session limit (10,000 default)
  • Origin validation for CORS

CLI Commands

nixos-options

nixos-options serve                    # Run MCP server on STDIO (default)
nixos-options serve --transport http   # Run MCP server on HTTP
nixos-options index <revision>         # Index a nixpkgs revision
nixos-options index --force <r>        # Force re-index existing revision
nixos-options index --no-files         # Skip file content indexing
nixos-options list                     # List indexed revisions
nixos-options search <query>           # Search options
nixos-options get <option>             # Get option details
nixos-options delete <revision>        # Delete indexed revision
nixos-options --version                # Show version

hm-options

hm-options serve                       # Run MCP server on STDIO (default)
hm-options serve --transport http      # Run MCP server on HTTP
hm-options index <revision>            # Index a home-manager revision
hm-options index --force <r>           # Force re-index existing revision
hm-options index --no-files            # Skip file content indexing
hm-options list                        # List indexed revisions
hm-options search <query>              # Search options
hm-options get <option>                # Get option details
hm-options delete <revision>           # Delete indexed revision
hm-options --version                   # Show version

Channel Aliases

nixos-options: nixos-unstable, nixos-stable, nixos-24.11, nixos-24.05, etc.

hm-options: hm-unstable, hm-stable, master, release-24.11, release-24.05, etc.

Notes for Claude

Development Workflow

• Always run go fmt ./... before committing Go code
• Run Go commands using nix develop -c (e.g., nix develop -c go test ./...)
• Use nix run to run binaries (e.g., nix run .#nixos-options -- serve)
• File paths in responses should use format path/to/file.go:123

Nix Build Requirement

IMPORTANT: When running nix build, nix run, or similar commands, new files must be tracked by git first. Nix flakes only see git-tracked files. If you create new files, run git add <file> before attempting nix operations.

Version Bumping

Version bumps should be done once per feature branch, not per commit. Rules:

• Patch bump (0.1.0 → 0.1.1): Changes to Go code within internal/ that affect a program
• Minor bump (0.1.0 → 0.2.0): Changes to Go code outside internal/ (e.g., cmd/)
• Major bump (0.1.0 → 1.0.0): Breaking changes to CLI usage or MCP protocol

Version is defined in multiple places that must stay in sync:

• cmd/nixos-options/main.go
• cmd/hm-options/main.go
• internal/mcp/server.go (in DefaultNixOSConfig and DefaultHomeManagerConfig)
• nix/package.nix

User Preferences

• User prefers PostgreSQL over SQLite (has homelab infrastructure)
• User values good test coverage and benchmarking
• Project should remain generic to support future MCP servers

Testing

# Run all tests
nix develop -c go test ./... -short

# Run with verbose output
nix develop -c go test ./... -v

# Run benchmarks (requires nix-build)
nix develop -c go test -bench=. -benchtime=1x -timeout=30m ./internal/nixos/...
nix develop -c go test -bench=. -benchtime=1x -timeout=30m ./internal/homemanager/...

Building

# Build with nix
nix build .#nixos-options
nix build .#hm-options

# Run directly
nix run .#nixos-options -- serve
nix run .#hm-options -- serve
nix run .#nixos-options -- index nixos-unstable
nix run .#hm-options -- index hm-unstable

Indexing Performance

Indexing operations are slow due to Nix evaluation and file downloads. When running index commands, use appropriate timeouts:

• nixos-options: ~5-6 minutes for nixos-unstable (with files)
• hm-options: ~1-2 minutes for master (with files)

Use --no-files flag for faster indexing (~1-2 minutes) if file content lookup isn't needed.